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The spectrum of BRCA1 gene mutations in early onset breast cancer patients from Russia

https://doi.org/10.21294/1814-4861-2018-17-4-53-58

Abstract

Aim of the study. Aim of the study was to estimate the occurrence of pathogenic mutations in the BRCA1 gene in Russian breast cancer patients.

Material and methods. Complete coding sequence of the BRCA1 gene of 445 early onset  breast cancer patients (under 40 years) from Novosibirsk region (Russia) were analyzed by  targeted Next Generation Sequencing (NGS) using Ion Torrent platform. Results. Forty (9%) carriers of various pathogenic mutations were revealed. Thirty five (7,9%) patients  carried 5382insC mutation, described earlier as a founder mutation for Slavic population.  Five (1.1%) patients carried various pathogenic mutations, namely C61G, 462delCC, E143X,  4153delA, and IVS18+1G>T. Besides, 29 genetic variants with no clinical significance or with  unknown clinical significance were detected in BRCA1 gene among 445 early onset breast  cancer patients. Conclusions. Data on the frequency of genetic variations in the BRCA1 gene among early onset breast cancer patients in the Novosibirsk Region (Russia) were  obtained. Proportion of the 5382insC mutation is 87.5% of all pathogenic mutations in the BRCA1 gene found in patients.

About the Authors

M. S. Anisimenko
Federal Research Center of Fundamental and Translational Medicine BioLink Ltd
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

2, Timakovа Street, 630117-Novosibirsk

junior research fellow, Federal Research Center of Fundamental and Translational Medicine

Researcher ID (WOS): I-3226-2017. Author ID (Scopus): 36514172600



G. A. Paul
BioLink Ltd
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

head of laboratory, laboratory physician, BioLink Ltd

Author ID (Scopus): 56417221700



A. E. Kozyakov
Novosibirsk Regional Oncological Clinic
Russian Federation

2, Plahotnogo Street, 630108-Novosibirsk, Russia

head of division, oncologist, Novosibirsk Regional Oncological Clinic

Author ID (Scopus): 56418702200



N. I. Gutkina
Federal Research Center of Fundamental and Translational Medicine
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

PhD, senior researcher, Federal Research Center of Fundamental and Translational Medicine  

Author ID (Scopus): 6701374482



D. A. Berdyugina
Federal Research Center of Fundamental and Translational Medicine BioLink Ltd
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

2, Timakovа Street, 630117-Novosibirsk

junior research fellow, Federal Research Center of Fundamental and Translational Medicine



A. Yu. Garanin
Federal Research Center of Fundamental and Translational Medicine BioLink Ltd
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

2, Timakovа Street, 630117-Novosibirsk

laboratory assistant, Federal Research Center of Fundamental and Translational Medicine



A. V. Butorina
Federal Research Center of Fundamental and Translational Medicine BioLink Ltd
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

2, Timakovа Street, 630117-Novosibirsk

laboratory assistant, Federal Research Center of Fundamental and Translational Medicine



E. V. Gornostaeva
Federal Research Center of Fundamental and Translational Medicine BioLink Ltd
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

2, Timakovа Street, 630117-Novosibirsk

junior research fellow, Federal Research Center of Fundamental and Translational Medicine



K. F. Khafizov
Central Research Institute of Epidemiology
Russian Federation

3а, Novogireevskaya Street, 111123-Moscow, Russia

PhD, head of scientific group, Central Research Institute of Epidemiology

Researcher ID (WOS): E-5368-2011. Author ID (Scopus): 26536043300



Yu. V. Vyatkin
AcademGene LLC
Russian Federation

6, Academician Lavrentiev Ave., 630090-Novosibirsk, Russia

head of Department of Bioinformatic technologies, AcademGene LLC

Researcher ID (WOS): E-8027-2018. Author ID (Scopus): 55651086400.



D. N. Shtokalo
AcademGene LLC A.P. Ershov Institute of Informatics Systems
Russian Federation

6, Academician Lavrentiev Ave., 630090-Novosibirsk, Russia

6, Akademika Lavrentieva Ave., 630090-Novosibirsk, Russia

PhD, senior researcher, A.P.Ershov Institute of Informatics Systems

Researcher ID (WOS): H-3351-2016. Author ID (Scopus): 14219725900



S. P. Kovalenko
Federal Research Center of Fundamental and Translational Medicine BioLink Ltd Novosibirsk State University
Russian Federation

2, Timakovа Street, 630117-Novosibirsk, Russia

2, Timakovа Street, 630117-Novosibirsk

1, Pirogova Street, 630090-Novosibirsk, Russia

PhD, head of laboratory, Federal Research Center of Fundamental and Translational Medicine  

Author ID (Scopus): 7101988072



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For citations:


Anisimenko M.S., Paul G.A., Kozyakov A.E., Gutkina N.I., Berdyugina D.A., Garanin A.Yu., Butorina A.V., Gornostaeva E.V., Khafizov K.F., Vyatkin Yu.V., Shtokalo D.N., Kovalenko S.P. The spectrum of BRCA1 gene mutations in early onset breast cancer patients from Russia. Siberian journal of oncology. 2018;17(4):53-58. https://doi.org/10.21294/1814-4861-2018-17-4-53-58

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ISSN 1814-4861 (Print)
ISSN 2312-3168 (Online)