The spectrum of BRCA1 gene mutations in early onset breast cancer patients from Russia
https://doi.org/10.21294/1814-4861-2018-17-4-53-58
Abstract
Aim of the study. Aim of the study was to estimate the occurrence of pathogenic mutations in the BRCA1 gene in Russian breast cancer patients.
Material and methods. Complete coding sequence of the BRCA1 gene of 445 early onset breast cancer patients (under 40 years) from Novosibirsk region (Russia) were analyzed by targeted Next Generation Sequencing (NGS) using Ion Torrent platform. Results. Forty (9%) carriers of various pathogenic mutations were revealed. Thirty five (7,9%) patients carried 5382insC mutation, described earlier as a founder mutation for Slavic population. Five (1.1%) patients carried various pathogenic mutations, namely C61G, 462delCC, E143X, 4153delA, and IVS18+1G>T. Besides, 29 genetic variants with no clinical significance or with unknown clinical significance were detected in BRCA1 gene among 445 early onset breast cancer patients. Conclusions. Data on the frequency of genetic variations in the BRCA1 gene among early onset breast cancer patients in the Novosibirsk Region (Russia) were obtained. Proportion of the 5382insC mutation is 87.5% of all pathogenic mutations in the BRCA1 gene found in patients.
About the Authors
M. S. AnisimenkoRussian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
2, Timakovа Street, 630117-Novosibirsk
junior research fellow, Federal Research Center of Fundamental and Translational Medicine
Researcher ID (WOS): I-3226-2017. Author ID (Scopus): 36514172600
G. A. Paul
Russian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
head of laboratory, laboratory physician, BioLink Ltd
Author ID (Scopus): 56417221700
A. E. Kozyakov
Russian Federation
2, Plahotnogo Street, 630108-Novosibirsk, Russia
head of division, oncologist, Novosibirsk Regional Oncological Clinic
Author ID (Scopus): 56418702200
N. I. Gutkina
Russian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
PhD, senior researcher, Federal Research Center of Fundamental and Translational Medicine
Author ID (Scopus): 6701374482
D. A. Berdyugina
Russian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
2, Timakovа Street, 630117-Novosibirsk
junior research fellow, Federal Research Center of Fundamental and Translational Medicine
A. Yu. Garanin
Russian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
2, Timakovа Street, 630117-Novosibirsk
laboratory assistant, Federal Research Center of Fundamental and Translational Medicine
A. V. Butorina
Russian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
2, Timakovа Street, 630117-Novosibirsk
laboratory assistant, Federal Research Center of Fundamental and Translational Medicine
E. V. Gornostaeva
Russian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
2, Timakovа Street, 630117-Novosibirsk
junior research fellow, Federal Research Center of Fundamental and Translational Medicine
K. F. Khafizov
Russian Federation
3а, Novogireevskaya Street, 111123-Moscow, Russia
PhD, head of scientific group, Central Research Institute of Epidemiology
Researcher ID (WOS): E-5368-2011. Author ID (Scopus): 26536043300
Yu. V. Vyatkin
Russian Federation
6, Academician Lavrentiev Ave., 630090-Novosibirsk, Russia
head of Department of Bioinformatic technologies, AcademGene LLC
Researcher ID (WOS): E-8027-2018. Author ID (Scopus): 55651086400.
D. N. Shtokalo
Russian Federation
6, Academician Lavrentiev Ave., 630090-Novosibirsk, Russia
6, Akademika Lavrentieva Ave., 630090-Novosibirsk, Russia
PhD, senior researcher, A.P.Ershov Institute of Informatics Systems
Researcher ID (WOS): H-3351-2016. Author ID (Scopus): 14219725900
S. P. Kovalenko
Russian Federation
2, Timakovа Street, 630117-Novosibirsk, Russia
2, Timakovа Street, 630117-Novosibirsk
1, Pirogova Street, 630090-Novosibirsk, Russia
PhD, head of laboratory, Federal Research Center of Fundamental and Translational Medicine
Author ID (Scopus): 7101988072
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Review
For citations:
Anisimenko M.S., Paul G.A., Kozyakov A.E., Gutkina N.I., Berdyugina D.A., Garanin A.Yu., Butorina A.V., Gornostaeva E.V., Khafizov K.F., Vyatkin Yu.V., Shtokalo D.N., Kovalenko S.P. The spectrum of BRCA1 gene mutations in early onset breast cancer patients from Russia. Siberian journal of oncology. 2018;17(4):53-58. https://doi.org/10.21294/1814-4861-2018-17-4-53-58